- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | sme-mir-92 | mir-92 | sme-miR-92 | 20/20 | Contig3673.1 | - | 53-72 | N/A | - | miRBase_13_0 | 47/65 | 1/170 |
2 | sme-mir-87b | mir-87 | sme-miR-87b | 21/21 | Contig34678.2 | - | 70-90 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
3 | sme-mir-87a | mir-87 | sme-miR-87a | 20/20 | Contig529.1 | - | 60-79 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
4 | sme-mir-8 | mir-8 | sme-miR-8 | 23/23 | Contig19143.1 | - | 45-67 | N/A | - | miRBase_13_0 | 20/23 | 1/35 |
5 | sme-mir-79 | mir-79 | sme-miR-79 | 23/23 | Contig20301.1 | - | 56-78 | N/A | - | miRBase_13_0 | 22/28 | 1/45 |
6 | sme-mir-756 | mir-756 | sme-miR-756 | 22/22 | Contig23145.1 | + | 18-39 | N/A | - | miRBase_13_0 | 1/2 | 1/2 |
7 | sme-mir-755 | mir-755 | sme-miR-755 | 20/20 | Contig8015.1 | - | 10-29 | N/A | - | miRBase_13_0 | 1/2 | 1/2 |
8 | sme-mir-754 | mir-754 | sme-miR-754 | 20/20 | Contig103150.1 | - | 10-29 | N/A | - | miRBase_13_0 | 1/2 | 1/2 |
9 | sme-mir-753 | mir-753 | sme-miR-753 | 20/20 | Contig614188.1 | + | 15-34 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
10 | sme-mir-752 | mir-752 | sme-miR-752 | 18/18 | Contig65.1 | - | 71-88 | N/A | - | miRBase_13_0 | 1/4 | 1/22 |
11 | sme-mir-751 | mir-751 | sme-miR-751 | 21/21 | Contig4542.6 | - | 58-78 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
12 | sme-mir-750 | mir-750 | sme-miR-750 | 23/23 | Contig8015.1 | - | 67-89 | N/A | - | miRBase_13_0 | 3/3 | 1/3 |
13 | sme-mir-749 | mir-749 | sme-miR-749 | 21/21 | Contig3805.1 | + | 4-24 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
14 | sme-mir-748 | mir-748 | sme-miR-748 | 19/19 | Contig1870.6 | + | 46-64 | N/A | - | miRBase_13_0 | 1/2 | 1/2 |
15 | sme-mir-747 | mir-747 | sme-miR-747 | 23/23 | Contig3161.1 | + | 14-36 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
16 | sme-mir-746 | mir-746 | sme-miR-746 | 22/22 | Contig33720.2 | + | 87-108 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
17 | sme-mir-745 | mir-745 | sme-miR-745 | 23/23 | Contig7325.1 | + | 55-77 | N/A | - | miRBase_13_0 | 3/8 | 1/10 |
18 | sme-mir-71c | mir-71 | sme-miR-71c | 22/22 | Contig2221.1 | - | 11-32 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
19 | sme-mir-71b | mir-71 | sme-miR-71b | 22/22 | Contig65.1 | - | 16-37 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
20 | sme-mir-71a-2 | mir-71 | sme-miR-71a | 22/22 | Contig11992.1 | + | 12-33 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
21 | sme-mir-71b | mir-71 | sme-miR-71b* | 20/20 | Contig65.1 | - | 61-80 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
22 | sme-mir-71a-1 | mir-71 | sme-miR-71a | 22/22 | Contig3375.4 | + | 17-38 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
23 | sme-mir-7c | mir-7 | sme-miR-7c | 22/22 | Contig13031.4 | + | 21-42 | N/A | - | miRBase_13_0 | 46/63 | 3/143 |
24 | sme-mir-7a | mir-7 | sme-miR-7a | 23/23 | Contig1550.1 | + | 8-30 | N/A | - | miRBase_13_0 | 46/63 | 3/143 |
25 | sme-mir-7b | mir-7 | sme-miR-7b | 23/23 | Contig4134.1 | + | 24-46 | N/A | - | miRBase_13_0 | 46/63 | 3/143 |
26 | sme-mir-67 | mir-67 | sme-miR-67 | 23/23 | Contig1683.1 | + | 46-68 | N/A | - | miRBase_13_0 | 5/5 | 1/5 |
27 | sme-mir-61 | mir-61 | sme-miR-61 | 23/23 | Contig32022.1 | + | 60-82 | N/A | - | miRBase_13_0 | 3/5 | 1/7 |
28 | sme-mir-36 | mir-36 | sme-miR-36* | 20/20 | Contig26708.2 | + | 14-33 | N/A | - | miRBase_13_0 | 3/4 | 1/6 |
29 | sme-mir-36 | mir-36 | sme-miR-36 | 21/21 | Contig26708.2 | + | 53-73 | N/A | - | miRBase_13_0 | 3/4 | 1/6 |
30 | sme-mir-31a | mir-31 | sme-miR-31a | 23/23 | Contig6766.4 | + | 19-41 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
31 | sme-mir-31b | mir-31 | sme-miR-31b | 23/23 | Contig42351.1 | + | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
32 | sme-mir-281 | mir-281 | sme-miR-281* | 20/20 | Contig7484.2 | - | 14-33 | N/A | - | miRBase_13_0 | 25/33 | 1/68 |
33 | sme-mir-281 | mir-281 | sme-miR-281 | 19/19 | Contig7484.2 | - | 65-83 | N/A | - | miRBase_13_0 | 25/33 | 1/68 |
34 | sme-mir-278 | mir-278 | sme-miR-278 | 20/20 | Contig1734.1 | - | 65-84 | N/A | - | miRBase_13_0 | 21/21 | 1/26 |
35 | sme-mir-277d | mir-277 | sme-miR-277d | 22/22 | Contig20753.1 | + | 48-69 | N/A | - | miRBase_13_0 | 17/17 | 4/32 |
36 | sme-mir-277b | mir-277 | sme-miR-277b* | 20/20 | Contig22157.2 | - | 14-33 | N/A | - | miRBase_13_0 | 17/17 | 4/32 |
37 | sme-mir-277b | mir-277 | sme-miR-277b | 22/22 | Contig22157.2 | - | 49-70 | N/A | - | miRBase_13_0 | 17/17 | 4/32 |
38 | sme-mir-277a | mir-277 | sme-miR-277a | 22/22 | Contig22157.2 | - | 55-76 | N/A | - | miRBase_13_0 | 17/17 | 4/32 |
39 | sme-mir-277c | mir-277 | sme-miR-277c | 22/22 | Contig20753.1 | + | 55-76 | N/A | - | miRBase_13_0 | 17/17 | 4/32 |
40 | sme-mir-219 | mir-219 | sme-miR-219 | 23/23 | Contig2622.2 | - | 15-37 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
41 | sme-mir-2a-2 | mir-2 | sme-miR-2a* | 20/20 | Contig11992.1 | + | 15-34 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
42 | sme-mir-2a-1 | mir-2 | sme-miR-2a | 24/24 | Contig3375.4 | + | 56-79 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
43 | sme-mir-2b | mir-2 | sme-miR-2b | 22/22 | Contig1775.1 | + | 47-68 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
44 | sme-mir-2c | mir-2 | sme-miR-2c | 22/22 | Contig2221.1 | - | 54-75 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
45 | sme-mir-2b | mir-2 | sme-miR-2b* | 20/20 | Contig1775.1 | + | 12-31 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
46 | sme-mir-2a-2 | mir-2 | sme-miR-2a | 24/24 | Contig11992.1 | + | 47-70 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
47 | sme-mir-2d | mir-2 | sme-miR-2d | 21/21 | Contig65.1 | - | 72-92 | N/A | - | miRBase_13_0 | 20/21 | 5/116 |
48 | sme-mir-190a | mir-190 | sme-miR-190a | 23/23 | Contig7303.2 | - | 12-34 | N/A | - | miRBase_13_0 | 24/55 | 2/95 |
49 | sme-mir-190b | mir-190 | sme-miR-190b* | 23/23 | Contig122.1 | + | 56-78 | N/A | - | miRBase_13_0 | 24/55 | 2/95 |
50 | sme-mir-190b | mir-190 | sme-miR-190b | 23/23 | Contig122.1 | + | 14-36 | N/A | - | miRBase_13_0 | 24/55 | 2/95 |
51 | sme-mir-190a | mir-190 | sme-miR-190a* | 21/21 | Contig7303.2 | - | 44-64 | N/A | - | miRBase_13_0 | 24/55 | 2/95 |
52 | sme-mir-184 | mir-184 | sme-miR-184 | 20/20 | Contig16367.1 | - | 59-78 | N/A | - | miRBase_13_0 | 40/54 | 1/73 |
53 | sme-mir-133 | mir-133 | sme-miR-133 | 20/20 | Contig9270.1 | + | 51-70 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
54 | sme-mir-13 | mir-13 | sme-miR-13 | 22/22 | Contig65.1 | - | 37-58 | N/A | - | miRBase_13_0 | 17/18 | 1/75 |
55 | sme-mir-125b | mir-125 | sme-miR-125b | 22/22 | Contig25124.1 | + | 16-37 | N/A | - | miRBase_13_0 | 45/62 | 2/195 |
56 | sme-mir-125a | mir-125 | sme-miR-125a | 22/22 | Contig2008.1 | + | 19-40 | N/A | - | miRBase_13_0 | 45/62 | 2/195 |
57 | sme-mir-125a | mir-125 | sme-miR-125a* | 20/20 | Contig2008.1 | + | 58-77 | N/A | - | miRBase_13_0 | 45/62 | 2/195 |
58 | sme-mir-124c | mir-124 | sme-miR-124c* | 22/22 | Contig7690.1 | - | 19-40 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
59 | sme-mir-124c | mir-124 | sme-miR-124c | 21/21 | Contig7690.1 | - | 52-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
60 | sme-mir-124a | mir-124 | sme-miR-124a | 21/21 | Contig34648.1 | + | 52-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
61 | sme-mir-124b | mir-124 | sme-miR-124b | 22/22 | Contig7627.5 | - | 50-71 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
62 | sme-mir-12 | mir-12 | sme-miR-12 | 22/22 | Contig14038.1 | - | 19-40 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
63 | sme-mir-10 | mir-10 | sme-miR-10 | 22/22 | Contig37731.1 | + | 15-36 | N/A | - | miRBase_13_0 | 43/59 | 1/124 |
64 | sme-mir-10 | mir-10 | sme-miR-10* | 18/18 | Contig37731.1 | + | 76-93 | N/A | - | miRBase_13_0 | 43/59 | 1/124 |
65 | sme-mir-1a | mir-1 | sme-miR-1a | 22/22 | Contig7932.2 | + | 50-71 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
66 | sme-mir-1c | mir-1 | sme-miR-1c | 21/21 | Contig615.2 | + | 48-68 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
67 | sme-mir-1b | mir-1 | sme-miR-1b | 22/22 | Contig615.2 | + | 52-73 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
68 | sme-lin-4 | lin-4 | sme-lin-4 | 22/22 | Contig1494.1 | + | 14-35 | N/A | - | miRBase_13_0 | 3/5 | 1/5 |
69 | sme-let-7b | let-7 | sme-let-7b* | 22/22 | Contig84808.1 | - | 48-69 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
70 | sme-let-7a | let-7 | sme-let-7a | 22/22 | Contig26041.2 | + | 11-32 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
71 | sme-let-7c | let-7 | sme-let-7c | 22/22 | Contig24059.1 | + | 15-36 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
72 | sme-let-7b | let-7 | sme-let-7b | 22/22 | Contig84808.1 | - | 15-36 | N/A | - | miRBase_13_0 | 44/65 | 3/337 |
73 | sme-bantam-a | bantam | sme-bantam-a | 21/21 | Contig17968.1 | - | 42-62 | N/A | - | miRBase_13_0 | 20/22 | 3/30 |
74 | sme-bantam-c | bantam | sme-bantam-c | 22/22 | Contig32851.1 | + | 39-60 | N/A | - | miRBase_13_0 | 20/22 | 3/30 |
75 | sme-bantam-b | bantam | sme-bantam-b | 22/22 | Contig5321.1 | - | 43-64 | N/A | - | miRBase_13_0 | 20/22 | 3/30 |
Total | 75 record(s). |